Posts tagged ‘alignment’

• The type system, safety, sequence alignments, and you - April, 2012
  alignment, static types, programming

  An simple example that illustrates how to leverage the type system to reduce the possibility of errors. By making our types more polymorphic (or less specific), we restrict the possible implementations.
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• From alignments to sequence clustering - March, 2012
  alignment, clustering

  The biopsl library is updated with some filtering and selection tools, and there's a simple clustering program using PSL files as its input.
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• Recent developments: Flower and Bamstats - January, 2012
  alignment, sequencing

  A new utility for getting some information from BAM alignment files, and a small update to `flower`.
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