tags

454 BAM Bayes' theorem EST Illumina RNAseq SFF SNP analysis alignment alignments annotation assembly comparison big data biocore biohaskell bioinformatics blast bloom filters carbon footprint clustering conscience de novo de novo assembly de novo genome environment fasta frequentist genome sequencing hardware hpc illustration library make meta optimization parsing productivity profiling programming science sequence alignment sequence analysis sequencing shell software static types transalign unexplained vector masking whales

About...

Me

I work with bioinformatics at the Institute of Marine Research, Bergen, Norway.

Bioinformatics

Basically applying algorithms from computer scientists to data from biologists. Being interdisciplinary is a nice excuse for not doing proper work.

Science!

For those interested, there is a list of selected publications, which includes a link to a CV.

This site

This is a small experiment in building a blog using Hakyll, a static site generator.

Haskell

The programming language which Hakyll is implemented in, and which I use for most of my programming projects.

Feedback? Please email ketil@malde.org.